Patrick Schreiner

Bioinoformatics Research Scientist
St. Jude Profile
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ORCID
0000-0001-5391-2642
Twitter
pschreins
GitHub
stjudecab
NCBI Bibliography
Patrick Schreiner
LinkedIn
Patrick Schreiner
Email
patrick.schreinerobfuscate#stjude.org

Overview

Patrick’s graduate research was focused on the origin and function of sRNA mainly in the yellow fever mosquito. In addition to mosquito samples, Patrick also has experience in analyzing data from bacteria, yeast, ferret, mice, and human samples. He received his Ph.D. in Genetics, Genomics, and Bioinformatics from the University of California, Riverside in 2017 before coming to St. Jude as a Bioinformatics Research Scientist. Patrick has led the execution of projects that mine and analyze big data from internal and external datasets. His particular research areas of interest include Transcriptomics, Immunology, and Single-Cell Omics.

NGS Data that Patrick knows how to analyze:

  • RNA-Seq
  • scRNA-Seq
  • scATAC-Seq
  • Microarray (Expression)
  • WGBS/TEBS

Education

  • PhD, University of California, Riverside (2017)
  • BS, Loyola University of Chicago (2012)

Professional Experience

Time Position PI/Supervisor Institution
2017- Bioinformatics Gang Wu / St. Jude Children’s Research Hospital
  Research Scientist Yiping Fan  

2021:1

  1. Elife
    Surprising phenotypic diversity of cancer-associated mutations of Gly 34 in the histone H3 tail
    Lowe Brandon R, Yadav Rajesh K, Henry Ryan A, Schreiner Patrick, Matsuda Atsushi, Fernandez Alfonso G, Finkelstein David, Campbell Margaret, Kallappagoudar Satish, Jablonowski Carolyn M, others
    Elife 2021
    DOI GEO:RNA_Yeast

2020:2

  1. Cell
    Synergism of TNF-αand IFN-γtriggers inflammatory cell death, tissue damage, and mortality in SARS-CoV-2 infection and cytokine shock syndromes
    Karki Rajendra, Sharma Bhesh Raj, Tuladhar Shraddha, Williams Evan Peter, Zalduondo Lillian, Samir Parimal, Zheng Min, Sundaram Balamurugan, Banoth Balaji, Malireddi RK Subbarao, others
    Cell 2020
    DOI GEO:RNA_Human
  2. JCI insight
    MyD88/CD40 signaling retains CAR T cells in a less differentiated state
    Prinzing Brooke, Schreiner Patrick, Bell Matthew, Fan Yiping, Krenciute Giedre, Gottschalk Stephen
    JCI insight 2020
    DOI GEO:RNA_Human

2019:1

  1. Nature communication
    Long-read sequencing unveils IGH-DUX4 translocation into the silenced IGH allele in B-cell acute lymphoblastic leukemia
    Tian Liqing, Shao Ying, Nance Stephanie, Dang Jinjun, Xu Beisi, Ma Xiaotu, Li Yongjin, Ju Bensheng, Dong Li, Newman Scott, others
    Nature communications 2019
    DOI GEO:RNA_Human